Samples since 11th May 2026

Region Total XFG.14.1 %
Africa / Egypt 111 0 0%
Africa / Ghana 5 0 0%
Africa / Ghana / Bono East 2 0 0%
Africa / Ghana / Greater Accra 1 0 0%
Africa / Ghana / Volta 1 0 0%
Africa / Ghana / Western 1 0 0%
Africa / South Africa 28 0 0%
Africa / South Africa / Eastern Cape 1 0 0%
Africa / South Africa / Eastern Cape / Komani 1 0 0%
Africa / South Africa / Gauteng 17 0 0%
Africa / South Africa / Limpopo 1 0 0%
Africa / South Africa / Mpumalanga 2 0 0%
Africa / South Africa / North West 1 0 0%
Africa / South Africa / Western Cape 6 0 0%
Africa / South Africa / Western Cape / Cape Town 1 0 0%
Africa / South Africa / Western Cape / Paarl 1 0 0%
Africa / South Africa / Western Cape / Strand 1 0 0%
Africa / Zambia 2 0 0%
Africa / Zambia / Livingstone 1 0 0%
Africa / Zambia / Ndola 1 0 0%
Asia / Cambodia 16 0 0%
Asia / Hong Kong 196 0 0%
Asia / India 85 0 0%
Asia / India / Andhra Pradesh 13 0 0%
Asia / India / Andhra Pradesh / Guntur 1 0 0%
Asia / India / Andhra Pradesh / Kakinada 1 0 0%
Asia / India / Andhra Pradesh / Mangalgiri 10 0 0%
Asia / India / Andhra Pradesh / Vijaywada 1 0 0%
Asia / India / Delhi 4 0 0%
Asia / India / Delhi / Delhi 4 0 0%
Asia / India / Gujarat 4 0 0%
Asia / India / Gujarat / Ahmedabad 3 0 0%
Asia / India / Gujarat / Surat 1 0 0%
Asia / India / Karnataka 19 0 0%
Asia / India / Karnataka / Hassan 14 0 0%
Asia / India / Karnataka / Hubballi 1 0 0%
Asia / India / Karnataka / Mysore 3 0 0%
Asia / India / Karnataka / Mysuru 1 0 0%
Asia / India / Kerala 16 0 0%
Asia / India / Kerala / Alappuzha 16 0 0%
Asia / India / Maharashtra 15 0 0%
Asia / India / Maharashtra / Mumbai 7 0 0%
Asia / India / Maharashtra / Pune 8 0 0%
Asia / India / Punjab 1 0 0%
Asia / India / Punjab / Mohali 1 0 0%
Asia / India / Tamil Nadu 12 0 0%
Asia / India / Tamil Nadu / Chennai 2 0 0%
Asia / India / Tamil Nadu / Coimbatore 4 0 0%
Asia / India / Tamil Nadu / Madhurai 4 0 0%
Asia / India / Tamil Nadu / Salem 2 0 0%
Asia / India / Uttarakhand 1 0 0%
Asia / India / Uttarakhand / Nainital 1 0 0%
Asia / Japan 94 0 0%
Asia / Japan / Ehime 1 0 0%
Asia / Japan / Fukushima 3 0 0%
Asia / Japan / Hiroshima 18 0 0%
Asia / Japan / Hyogo 31 0 0%
Asia / Japan / Ishikawa 2 0 0%
Asia / Japan / Kanagawa 1 0 0%
Asia / Japan / Miyagi 3 0 0%
Asia / Japan / Okayama 10 0 0%
Asia / Japan / Osaka 8 0 0%
Asia / Japan / Saitama 12 0 0%
Asia / Japan / Toyama 1 0 0%
Asia / Japan / Yamanashi 3 0 0%
Asia / Malaysia 58 0 0%
Asia / Malaysia / Kedah 5 0 0%
Asia / Malaysia / Kedah / Alor Setar 3 0 0%
Asia / Malaysia / Kedah / Langkawi 1 0 0%
Asia / Malaysia / Kedah / Sungai Petani 1 0 0%
Asia / Malaysia / Kelantan 16 0 0%
Asia / Malaysia / Kelantan / Gua Musang 7 0 0%
Asia / Malaysia / Kelantan / Kota Bharu 6 0 0%
Asia / Malaysia / Kelantan / Pasir Mas 2 0 0%
Asia / Malaysia / Kelantan / Rantau Panjang 1 0 0%
Asia / Malaysia / Pahang 1 0 0%
Asia / Malaysia / Pahang / Temerloh 1 0 0%
Asia / Malaysia / Penang 15 0 0%
Asia / Malaysia / Penang / Bayan Baru 6 0 0%
Asia / Malaysia / Penang / Jalan Perak 9 0 0%
Asia / Malaysia / Perak 12 0 0%
Asia / Malaysia / Perak / Buntong 6 0 0%
Asia / Malaysia / Perak / Jelapang 1 0 0%
Asia / Malaysia / Perak / Simpang 3 0 0%
Asia / Malaysia / Perak / Tanjung Malim 2 0 0%
Asia / Malaysia / Perlis 2 0 0%
Asia / Malaysia / Perlis / Kangar 2 0 0%
Asia / Malaysia / Sabah 1 0 0%
Asia / Malaysia / Terengganu 6 0 0%
Asia / Malaysia / Terengganu / Chendering 5 0 0%
Asia / Malaysia / Terengganu / Manir 1 0 0%
Asia / Singapore 1011 1 0%
Asia / South Korea 42 0 0%
Asia / Taiwan 12 0 0%
Asia / Thailand 60 0 0%
Asia / Thailand / Bangkok 47 0 0%
Asia / Thailand / Chiang Rai 1 0 0%
Asia / Thailand / Chon Buri 2 0 0%
Asia / Thailand / Nakhon Phanom 2 0 0%
Asia / Thailand / Nonthaburi 1 0 0%
Asia / Thailand / Phra Nakhon Si Ayutthaya 1 0 0%
Asia / Thailand / Phuket 2 0 0%
Asia / Thailand / Ranong 2 0 0%
Asia / Thailand / Tak 2 0 0%
Europe / France 17 0 0%
Europe / France / Auvergne-Rhone-Alpes 11 0 0%
Europe / France / Auvergne-Rhone-Alpes / Isere 3 0 0%
Europe / France / Auvergne-Rhone-Alpes / Loire 5 0 0%
Europe / France / Auvergne-Rhone-Alpes / Rhone 3 0 0%
Europe / France / Occitanie 5 0 0%
Europe / France / Occitanie / Haute-Garonne 5 0 0%
Europe / France / Provence-Alpes-Cote d’Azur 1 0 0%
Europe / France / Provence-Alpes-Cote d’Azur / Bouches-du-Rhone 1 0 0%
Europe / Germany 1 0 0%
Europe / Germany / North Rhine-Westphalia 1 0 0%
Europe / Ireland 9 0 0%
Europe / Ireland / Cork 1 0 0%
Europe / Ireland / Dublin 4 0 0%
Europe / Ireland / Galway 1 0 0%
Europe / Ireland / Limerick 1 0 0%
Europe / Ireland / Louth 1 0 0%
Europe / Ireland / Mayo 1 0 0%
Europe / Italy 6 0 0%
Europe / Italy / Lombardy 2 0 0%
Europe / Italy / South Tyrol 1 0 0%
Europe / Poland 7 3 43%
Europe / Poland / Malopolskie 3 0 0%
Europe / Poland / Pomorze 3 3 100%
Europe / Portugal 13 0 0%
Europe / Romania 1 0 0%
Europe / Romania / Bucuresti 1 0 0%
Europe / Russia 36 0 0%
Europe / Russia / Krasnodar Krai 4 0 0%
Europe / Russia / Krasnodar Krai / Dinskaya 1 0 0%
Europe / Russia / Krasnodar Krai / Korenovsk 1 0 0%
Europe / Russia / Krasnodar Krai / Krasnodar 1 0 0%
Europe / Russia / Krasnodar Krai / Severskaya 1 0 0%
Europe / Russia / Saint Petersburg 11 0 0%
Europe / Russia / Saint Petersburg / Sankt-Peterburg 10 0 0%
Europe / Russia / Saint Petersburg / Sestroretsk 1 0 0%
Europe / Russia / Saint-Petersburg 21 0 0%
Europe / Russia / Saint-Petersburg / Saint-Petersburg 21 0 0%
Europe / Slovenia 3 0 0%
Europe / Spain 107 4 4%
Europe / Spain / Andalusia 16 0 0%
Europe / Spain / Andalusia / Sevilla 16 0 0%
Europe / Spain / Asturias 15 1 7%
Europe / Spain / Basque Country 33 1 3%
Europe / Spain / Basque Country / Donostia-San Sebastian 31 1 3%
Europe / Spain / Basque Country / Vitoria-Gasteiz 2 0 0%
Europe / Spain / Castilla-La Mancha 4 0 0%
Europe / Spain / Castilla-La Mancha / Ciudad Real 4 0 0%
Europe / Spain / Catalunya 17 1 6%
Europe / Spain / Catalunya / Mataro 2 0 0%
Europe / Spain / Catalunya / Santa Coloma De Gramenet 2 0 0%
Europe / Spain / Extremadura 1 0 0%
Europe / Spain / Extremadura / Caceres 1 0 0%
Europe / Spain / Galicia 2 0 0%
Europe / Spain / Galicia / Santiago de Compostela 2 0 0%
Europe / Spain / Madrid 13 1 8%
Europe / Spain / Murcia 6 0 0%
Europe / Sweden 16 1 6%
Europe / Sweden / Jonkoping 2 0 0%
Europe / Sweden / Orebro 1 0 0%
Europe / Sweden / Stockholm 8 0 0%
Europe / Sweden / Uppsala 1 0 0%
Europe / Sweden / Vasterbotten 1 0 0%
Europe / Sweden / Vasternorrland 1 0 0%
Europe / Sweden / Vastmanland 2 1 50%
North America / Canada 295 12 4%
North America / Canada / Alberta 64 7 11%
North America / Canada / British Columbia 35 1 3%
North America / Canada / New Brunswick 3 0 0%
North America / Canada / Newfoundland and Labrador 5 0 0%
North America / Canada / Ontario 188 4 2%
North America / Costa Rica 166 18 11%
North America / Costa Rica / Alajuela 44 6 14%
North America / Costa Rica / Cartago 20 2 10%
North America / Costa Rica / DESCONOCIDA 1 0 0%
North America / Costa Rica / Guanacaste 2 0 0%
North America / Costa Rica / Heredia 12 2 17%
North America / Costa Rica / Limon 4 0 0%
North America / Costa Rica / Puntarenas 15 3 20%
North America / Costa Rica / San Jose 60 5 8%
North America / Dominican Republic 40 1 3%
North America / Dominican Republic / Azua 1 0 0%
North America / Dominican Republic / Distrito Nacional 7 0 0%
North America / Dominican Republic / Duarte 3 0 0%
North America / Dominican Republic / Espaillat 7 0 0%
North America / Dominican Republic / Hato Mayor 1 0 0%
North America / Dominican Republic / La Vega 1 1 100%
North America / Dominican Republic / Maria Trinidad Sanchez 1 0 0%
North America / Dominican Republic / Monsenor Nouel 3 0 0%
North America / Dominican Republic / Peravia 2 0 0%
North America / Dominican Republic / Samana 1 0 0%
North America / Dominican Republic / San Cristobal 1 0 0%
North America / Dominican Republic / San Pedro De Macoris 1 0 0%
North America / Dominican Republic / Santiago 2 0 0%
North America / Dominican Republic / Santo Domingo 8 0 0%
North America / Dominican Republic / Valverde 1 0 0%
North America / Mexico 28 0 0%
North America / Mexico / Mexico City 28 0 0%
North America / Puerto Rico 36 3 8%
North America / USA 748 39 5%
North America / USA / Arizona 43 1 2%
North America / USA / Arizona / Graham 7 0 0%
North America / USA / Arizona / Maricopa 17 1 6%
North America / USA / Arizona / Mohave 1 0 0%
North America / USA / Arizona / Pima 17 0 0%
North America / USA / Arizona / Pinal 1 0 0%
North America / USA / California 264 15 6%
North America / USA / California / Contra Costa 38 4 11%
North America / USA / Florida 10 1 10%
North America / USA / Hawaii 1 0 0%
North America / USA / Illinois 1 0 0%
North America / USA / Illinois / Cook County 1 0 0%
North America / USA / Maryland 21 0 0%
North America / USA / Missouri 1 0 0%
North America / USA / Nevada 16 1 6%
North America / USA / Nevada / Clark 16 1 6%
North America / USA / New Jersey 42 6 14%
North America / USA / New Mexico 3 0 0%
North America / USA / New York 244 12 5%
North America / USA / New York / Albany 1 0 0%
North America / USA / New York / Allegany County 3 0 0%
North America / USA / New York / Chenango 1 0 0%
North America / USA / New York / Cortland 2 0 0%
North America / USA / New York / Herkimer 1 0 0%
North America / USA / New York / Livingston County 3 0 0%
North America / USA / New York / Madison 2 0 0%
North America / USA / New York / Monroe County 34 0 0%
North America / USA / New York / Nassau County 1 0 0%
North America / USA / New York / New York City 120 10 8%
North America / USA / New York / Onondaga 32 0 0%
North America / USA / New York / Ontario County 5 0 0%
North America / USA / New York / Oswego 1 0 0%
North America / USA / New York / Saratoga 2 0 0%
North America / USA / New York / Schenectady 1 0 0%
North America / USA / New York / Schuyler County 1 0 0%
North America / USA / New York / Steuben County 2 1 50%
North America / USA / New York / Wayne County 1 0 0%
North America / USA / New York / Wyoming County 2 0 0%
North America / USA / North Dakota 1 0 0%
North America / USA / Oregon 1 0 0%
North America / USA / Pennsylvania 1 0 0%
North America / USA / Pennsylvania / Philadelphia 1 0 0%
North America / USA / Rhode Island 1 1 100%
North America / USA / Texas 14 0 0%
North America / USA / Texas / Johnson 2 0 0%
North America / USA / Texas / Tarrant 6 0 0%
North America / USA / Utah 8 0 0%
North America / USA / Vermont 6 0 0%
North America / USA / Virginia 42 2 5%
North America / USA / Washington 18 0 0%
North America / USA / Wisconsin 9 0 0%
North America / USA / Wyoming 1 0 0%
Oceania / Australia 823 3 0%
Oceania / Australia / New South Wales 387 2 1%
Oceania / Australia / New South Wales / Sydney 387 2 1%
Oceania / Australia / Queensland 169 1 1%
Oceania / Australia / South Australia 199 0 0%
Oceania / Australia / Western Australia 68 0 0%
Oceania / Guam 3 0 0%
Oceania / Guam / Yigo 3 0 0%
Oceania / New Caledonia 3 0 0%
Oceania / New Caledonia / Boulouparis 1 0 0%
Oceania / New Caledonia / Houailou 1 0 0%
Oceania / New Caledonia / Noumea 1 0 0%
Oceania / New Zealand 109 0 0%
Oceania / New Zealand / Auckland 9 0 0%
Oceania / New Zealand / Bay of Plenty 1 0 0%
Oceania / New Zealand / Canterbury 3 0 0%
Oceania / New Zealand / Capital and Coast 2 0 0%
Oceania / New Zealand / Counties Manukau 9 0 0%
Oceania / New Zealand / Hutt Valley 23 0 0%
Oceania / New Zealand / MidCentral 2 0 0%
Oceania / New Zealand / Nelson Marlborough 4 0 0%
Oceania / New Zealand / Northland 4 0 0%
Oceania / New Zealand / South Canterbury 1 0 0%
Oceania / New Zealand / Southern 24 0 0%
Oceania / New Zealand / Taranaki 7 0 0%
Oceania / New Zealand / Waikato 14 0 0%
Oceania / New Zealand / Waitemata 1 0 0%
Oceania / New Zealand / West Coast 5 0 0%
South America / Brazil 152 15 10%
South America / Brazil / Alagoas 2 0 0%
South America / Brazil / Alagoas / Maceio 2 0 0%
South America / Brazil / Amazonas 67 0 0%
South America / Brazil / Aracaju 4 4 100%
South America / Brazil / Espirito Santo 5 2 40%
South America / Brazil / Espirito Santo / Marechal Floriano 1 1 100%
South America / Brazil / Espirito Santo / Pedro Canario 1 1 100%
South America / Brazil / Espirito Santo / Santa Maria de Jetiba 1 0 0%
South America / Brazil / Espirito Santo / Vitoria 2 0 0%
South America / Brazil / Federal District 12 1 8%
South America / Brazil / Goias 11 0 0%
South America / Brazil / Goias / Anapolis 1 0 0%
South America / Brazil / Goias / Fazenda nova 1 0 0%
South America / Brazil / Goias / Goiania 6 0 0%
South America / Brazil / Goias / Pirenopolis 2 0 0%
South America / Brazil / Goias / Rio verde 1 0 0%
South America / Brazil / Para 1 0 0%
South America / Brazil / Parana 3 1 33%
South America / Brazil / Parana / Campina Grande do Sul 1 0 0%
South America / Brazil / Parana / Campo Largo 1 1 100%
South America / Brazil / Parana / Cianorte 1 0 0%
South America / Brazil / Rio de Janeiro 6 5 83%
South America / Brazil / Rio de Janeiro / Rio de Janeiro 6 5 83%
South America / Brazil / Rio Grande do Norte 13 0 0%
South America / Brazil / Rio Grande do Norte / Guamare 5 0 0%
South America / Brazil / Rio Grande do Norte / Natal 8 0 0%
South America / Brazil / Rio Grande do Sul 14 0 0%
South America / Brazil / Rio Grande do Sul / Bage 1 0 0%
South America / Brazil / Rio Grande do Sul / Campina das Missoes 1 0 0%
South America / Brazil / Rio Grande do Sul / Campo Bom 1 0 0%
South America / Brazil / Rio Grande do Sul / Canoas 3 0 0%
South America / Brazil / Rio Grande do Sul / Nao-me-Toque 2 0 0%
South America / Brazil / Rio Grande do Sul / Osorio 1 0 0%
South America / Brazil / Rio Grande do Sul / Porto Alegre 1 0 0%
South America / Brazil / Rio Grande do Sul / Santa Rosa 1 0 0%
South America / Brazil / Rio Grande do Sul / Vacaria 2 0 0%
South America / Brazil / Rio Grande do Sul / Veranopolis 1 0 0%
South America / Brazil / Rondonia 9 1 11%
South America / Brazil / Rondonia / Buritis 1 0 0%
South America / Brazil / Rondonia / Candeias do Jamary 2 0 0%
South America / Brazil / Rondonia / Guajara Mirim 1 0 0%
South America / Brazil / Rondonia / Porto Velho 4 1 25%
South America / Brazil / Rondonia / Teixeiropolis 1 0 0%
South America / Brazil / Sao Paulo 4 0 0%
South America / Brazil / Sao Paulo / Sao Paulo 4 0 0%
South America / Brazil / Sergipe 1 1 100%
South America / Brazil / Sergipe / Aracaju 1 1 100%
South America / Colombia 5 4 80%
South America / Colombia / Valle del Cauca 5 4 80%
South America / Colombia / Valle del Cauca / Cali 5 4 80%
South America / Ecuador 6 4 67%
South America / Ecuador / Azuay 1 1 100%
South America / Ecuador / Chimborazo 1 0 0%
South America / Ecuador / Esmeraldas 1 1 100%
South America / Ecuador / Imbabura 1 1 100%
South America / Ecuador / Napo 1 0 0%
South America / Ecuador / Pichincha 1 1 100%

Last Updated: 7 August 2026 21:59 BST — Local:

Table excludes airport surveillance samples from the USA and environmental samples from Germany. There may still be some others in the counts that shouldn't be there.

Acknowledgements

We gratefully acknowledge GISAID and the many data contributors around the world for sharing SARS-CoV-2 sequences.

This analysis makes use of the Nextclade CLI.
Aksamentov, I., Roemer, C., Hodcroft, E. B., & Neher, R. A., (2021). Nextclade: clade assignment, mutation calling and quality control for viral genomes. Journal of Open Source Software, 6(67), 3773, https://doi.org/10.21105/joss.03773

Special thanks to Josette Schoenmakers ( @josetteschoenma.bsky.social on BlueSky @JosetteSchoenma on Twitter) for the table concepts.