| Variant | Mutation | Mut count | Country count | Continent count | First date |
|---|---|---|---|---|---|
| SW.2.1 | S:-24L | 35 | 3 | 2 | 2026-06-10 |
| SW.2.1 | S:-25P | 35 | 3 | 2 | 2026-06-10 |
| SW.2.1 | S:-26P | 35 | 3 | 2 | 2026-06-10 |
| SW.2.1 | S:I19T | 35 | 3 | 2 | 2026-06-10 |
| SW.2.1 | S:N22T | 35 | 3 | 2 | 2026-06-10 |
| SW.2.1 | S:S27A | 29 | 3 | 2 | 2026-06-10 |
| SW.2.1 | S:T21R | 35 | 3 | 2 | 2026-06-10 |
| RF.5.4 | ORF1a:A385V | 14 | 3 | 3 | 2026-06-12 |
| RF.5.4 | ORF1b:N2695I | 7 | 2 | 2 | 2026-06-12 |
| RF.5.4 | ORF1b:T1540I | 11 | 3 | 3 | 2026-06-12 |
| RF.5.4 | ORF3a:A99V | 4 | 2 | 2 | 2026-06-12 |
| RK.1.2 | ORF1a:T1538I | 6 | 2 | 2 | 2026-06-14 |
| RV.1.3 | S:K1245R | 4 | 2 | 2 | 2026-06-16 |
| SV.1 | ORF1a:I1023T | 10 | 4 | 2 | 2026-06-16 |
| RV.1.3 | S:-211N | 7 | 3 | 2 | 2026-06-17 |
| SV.2 | S:R681H | 4 | 3 | 2 | 2026-06-17 |
| RF.5.4 | ORF8:V62M | 9 | 5 | 3 | 2026-06-20 |
| RK.1 | ORF8:V62L | 5 | 3 | 2 | 2026-06-22 |
| SV.4 | M:I128T | 10 | 3 | 2 | 2026-06-25 |
| SV.4 | N:T379N | 10 | 3 | 2 | 2026-06-25 |
| SV.4 | S:S680F | 10 | 3 | 2 | 2026-06-25 |
| RV.1.3 | ORF1b:D1939G | 7 | 2 | 2 | 2026-06-27 |
| RV.1.3 | ORF1b:K2557R | 7 | 3 | 3 | 2026-06-27 |
| RK.1 | ORF1a:D220N | 4 | 2 | 2 | 2026-06-29 |
| RF.5.4 | N:R204Q | 61 | 7 | 4 | 2026-06-30 |
| RF.5.4 | ORF3a:P42L | 60 | 7 | 4 | 2026-06-30 |
| RF.5.4 | ORF1a:P2018L | 15 | 4 | 3 | 2026-07-01 |
| RF.5.4 | ORF1a:T2154I | 15 | 4 | 3 | 2026-07-01 |
| RF.5.4 | ORF1a:I3862M | 7 | 2 | 2 | 2026-07-02 |
| RF.5.4 | ORF1a:I544V | 5 | 2 | 2 | 2026-07-02 |
| RF.5.4 | ORF1a:A2199V | 5 | 2 | 2 | 2026-07-05 |
| RF.5.4 | ORF1a:M1771V | 4 | 2 | 2 | 2026-07-07 |
| RF.5.4 | ORF1b:Y1748C | 4 | 3 | 2 | 2026-07-07 |
| RF.5.4 | ORF3a:L95F | 10 | 4 | 2 | 2026-07-07 |
| ST.1 | ORF1a:T1682I | 5 | 2 | 2 | 2026-07-07 |
| XFG.6.13.2 | ORF1b:P1727L | 7 | 3 | 3 | 2026-07-07 |
| SV.1.2 | S:R346K | 11 | 3 | 2 | 2026-07-08 |
| XFG.6.13.1 | S:Q675H | 4 | 3 | 2 | 2026-07-09 |
| SV.2 | S:H445Q | 6 | 3 | 3 | 2026-07-10 |
| RF.5.1 | ORF1a:P1692S | 5 | 2 | 2 | 2026-07-13 |
| RF.5.1 | ORF3a:H78D | 5 | 2 | 2 | 2026-07-13 |
| RK.1 | ORF1b:T1655I | 4 | 3 | 2 | 2026-07-13 |
| RF.5.4 | ORF3a:K21N | 4 | 2 | 2 | 2026-07-14 |
| RF.5.4 | ORF7a:I110V | 5 | 3 | 3 | 2026-07-25 |