Samples since 13th April 2026

Region Total XDV.1.5.1.1.8.1.10.1.3 %
Africa / Cote d’Ivoire 3 0 0%
Africa / Cote d’Ivoire / Attecoube 1 0 0%
Africa / Cote d’Ivoire / Man 1 0 0%
Africa / Cote d’Ivoire / San Pedro 1 0 0%
Africa / Ghana 25 0 0%
Africa / Ghana / Ashanti 1 0 0%
Africa / Ghana / Bono 1 0 0%
Africa / Ghana / Bono East 2 0 0%
Africa / Ghana / Eastern 1 0 0%
Africa / Ghana / Greater Accra 5 0 0%
Africa / Ghana / North East 2 0 0%
Africa / Ghana / Oti 1 0 0%
Africa / Ghana / Savannah 1 0 0%
Africa / Ghana / Upper East 1 0 0%
Africa / Ghana / Volta 9 0 0%
Africa / Ghana / Western 1 0 0%
Africa / Reunion 6 0 0%
Africa / South Africa 8 0 0%
Africa / South Africa / Gauteng 1 0 0%
Africa / South Africa / KwaZulu-Natal 2 0 0%
Africa / South Africa / Mpumalanga 2 0 0%
Africa / South Africa / North West 1 0 0%
Africa / South Africa / Western Cape 2 0 0%
Africa / South Africa / Western Cape / Cape Town 1 0 0%
Africa / Uganda 4 0 0%
Africa / Uganda / Kampala 2 0 0%
Africa / Uganda / Mukono 1 0 0%
Africa / Uganda / Wakiso 1 0 0%
Africa / Zambia 3 0 0%
Africa / Zambia / Livingstone 1 0 0%
Africa / Zambia / Lusaka 1 0 0%
Africa / Zambia / Ndola 1 0 0%
Asia / Cambodia 1 0 0%
Asia / Hong Kong 56 0 0%
Asia / Japan 69 0 0%
Asia / Japan / Ehime 1 0 0%
Asia / Japan / Fukushima 6 0 0%
Asia / Japan / Hiroshima 3 0 0%
Asia / Japan / Hyogo 20 0 0%
Asia / Japan / Ishikawa 1 0 0%
Asia / Japan / Kanagawa 3 0 0%
Asia / Japan / Osaka 3 0 0%
Asia / Japan / Saitama 22 0 0%
Asia / Japan / Tokushima 1 0 0%
Asia / Japan / Toyama 2 0 0%
Asia / Japan / Yamanashi 7 0 0%
Asia / Kazakhstan 2 0 0%
Asia / Kazakhstan / Astana 1 0 0%
Asia / Kazakhstan / Shymkent 1 0 0%
Asia / Malaysia 18 0 0%
Asia / Malaysia / Kedah 1 0 0%
Asia / Malaysia / Kedah / Langkawi 1 0 0%
Asia / Malaysia / Kelantan 11 0 0%
Asia / Malaysia / Kelantan / Kota Bharu 5 0 0%
Asia / Malaysia / Kelantan / Pasir Mas 5 0 0%
Asia / Malaysia / Pahang 2 0 0%
Asia / Malaysia / Pahang / Kuantan 1 0 0%
Asia / Malaysia / Pahang / Temerloh 1 0 0%
Asia / Malaysia / Penang 1 0 0%
Asia / Malaysia / Penang / Jalan Perak 1 0 0%
Asia / Malaysia / Perak 1 0 0%
Asia / Malaysia / Perak / Simpang 1 0 0%
Asia / Malaysia / Sabah 1 0 0%
Asia / Malaysia / Terengganu 1 0 0%
Asia / Malaysia / Terengganu / Chendering 1 0 0%
Asia / Singapore 974 1 0%
Asia / South Korea 67 0 0%
Asia / Taiwan 20 0 0%
Asia / Taiwan / Tainan 1 0 0%
Asia / Thailand 20 0 0%
Asia / Thailand / Bangkok 16 0 0%
Asia / Thailand / Nonthaburi 1 0 0%
Asia / Thailand / Phuket 1 0 0%
Asia / Thailand / Ranong 1 0 0%
Asia / Thailand / Surat Thani 1 0 0%
Asia / Vietnam 4 0 0%
Asia / Vietnam / Hanoi 4 0 0%
Europe / Belgium 1 0 0%
Europe / Belgium / Wallonie 1 0 0%
Europe / Croatia 1 0 0%
Europe / Croatia / The City of Zagreb 1 0 0%
Europe / Czech Republic 1 0 0%
Europe / Czech Republic / Plzen Region 1 0 0%
Europe / Czech Republic / Plzen Region / Plzen 1 0 0%
Europe / Denmark 4 0 0%
Europe / Estonia 2 0 0%
Europe / Finland 7 0 0%
Europe / France 36 0 0%
Europe / France / Auvergne-Rhone-Alpes 11 0 0%
Europe / France / Auvergne-Rhone-Alpes / Haute-Savoie 1 0 0%
Europe / France / Auvergne-Rhone-Alpes / Isere 2 0 0%
Europe / France / Auvergne-Rhone-Alpes / Rhone 8 0 0%
Europe / France / Bourgogne-Franche-Comte 2 0 0%
Europe / France / Bourgogne-Franche-Comte / Doubs 2 0 0%
Europe / France / Bretagne 1 0 0%
Europe / France / Grand Est 12 0 0%
Europe / France / Ile-de-France 1 0 0%
Europe / France / Ile-de-France / Paris 1 0 0%
Europe / France / Occitanie 1 0 0%
Europe / France / Occitanie / Haute-Garonne 1 0 0%
Europe / France / Provence-Alpes-Cote d’Azur 8 0 0%
Europe / France / Provence-Alpes-Cote d’Azur / Alpes-Maritimes 2 0 0%
Europe / France / Provence-Alpes-Cote d’Azur / Bouches-du-Rhone 6 0 0%
Europe / Germany 14 0 0%
Europe / Germany / Baden-Wurttemberg 1 0 0%
Europe / Germany / Bavaria 2 0 0%
Europe / Germany / Brandenburg 1 0 0%
Europe / Germany / North Rhine-Westphalia 10 0 0%
Europe / Ireland 9 0 0%
Europe / Ireland / Dublin 8 0 0%
Europe / Ireland / Galway 1 0 0%
Europe / Italy 27 0 0%
Europe / Italy / Lombardy 4 0 0%
Europe / Italy / Torino 3 0 0%
Europe / Netherlands 7 0 0%
Europe / Netherlands / Gelderland 1 0 0%
Europe / Netherlands / Limburg 1 0 0%
Europe / Netherlands / Noord-Brabant 1 0 0%
Europe / Netherlands / Noord-Holland 1 0 0%
Europe / Netherlands / Overijssel 2 0 0%
Europe / Netherlands / Zuid-Holland 1 0 0%
Europe / Norway 18 0 0%
Europe / Norway / Agder 1 0 0%
Europe / Norway / Akershus 2 0 0%
Europe / Norway / Buskerud 1 0 0%
Europe / Norway / Innlandet 1 0 0%
Europe / Norway / More og Romsdal 1 0 0%
Europe / Norway / Oslo 4 0 0%
Europe / Norway / Rogaland 1 0 0%
Europe / Norway / Troms 1 0 0%
Europe / Norway / Trondelag 2 0 0%
Europe / Norway / Vestfold 3 0 0%
Europe / Poland 9 0 0%
Europe / Poland / Malopolskie 3 0 0%
Europe / Poland / Pomorze 3 0 0%
Europe / Portugal 7 0 0%
Europe / Romania 1 0 0%
Europe / Romania / Bucuresti 1 0 0%
Europe / Russia 39 0 0%
Europe / Russia / Saint Petersburg 39 0 0%
Europe / Russia / Saint Petersburg / Sankt-Peterburg 39 0 0%
Europe / Slovakia 2 0 0%
Europe / Slovakia / Trenciansky kraj 2 0 0%
Europe / Slovenia 4 0 0%
Europe / Spain 121 0 0%
Europe / Spain / Andalusia 4 0 0%
Europe / Spain / Andalusia / Cordoba 1 0 0%
Europe / Spain / Andalusia / Sevilla 3 0 0%
Europe / Spain / Asturias 41 0 0%
Europe / Spain / Basque Country 26 0 0%
Europe / Spain / Basque Country / Bizkaia 5 0 0%
Europe / Spain / Basque Country / Donostia-San Sebastian 20 0 0%
Europe / Spain / Basque Country / Vitoria-Gasteiz 1 0 0%
Europe / Spain / Castilla-La Mancha 9 0 0%
Europe / Spain / Castilla-La Mancha / Ciudad Real 9 0 0%
Europe / Spain / Catalunya 22 0 0%
Europe / Spain / Catalunya / Alella 1 0 0%
Europe / Spain / Catalunya / Badalona 1 0 0%
Europe / Spain / Catalunya / Manresa 5 0 0%
Europe / Spain / Catalunya / Mataro 1 0 0%
Europe / Spain / Catalunya / Santa Coloma de Gramenet 2 0 0%
Europe / Spain / Madrid 5 0 0%
Europe / Spain / Murcia 14 0 0%
Europe / Sweden 36 0 0%
Europe / Sweden / Dalarna 2 0 0%
Europe / Sweden / Gavleborg County 4 0 0%
Europe / Sweden / Jonkoping 1 0 0%
Europe / Sweden / Orebro 1 0 0%
Europe / Sweden / Ostergotland 2 0 0%
Europe / Sweden / Stockholm 20 0 0%
Europe / Sweden / Vasterbotten 4 0 0%
Europe / Sweden / Vastmanland 2 0 0%
Europe / United Kingdom 3 0 0%
Europe / United Kingdom / Northern Ireland 3 0 0%
North America / Canada 643 0 0%
North America / Canada / Alberta 126 0 0%
North America / Canada / British Columbia 10 0 0%
North America / Canada / New Brunswick 13 0 0%
North America / Canada / Newfoundland and Labrador 8 0 0%
North America / Canada / Nova Scotia 1 0 0%
North America / Canada / Ontario 485 0 0%
North America / Costa Rica 35 0 0%
North America / Costa Rica / Alajuela 9 0 0%
North America / Costa Rica / Cartago 3 0 0%
North America / Costa Rica / Guanacaste 1 0 0%
North America / Costa Rica / Heredia 2 0 0%
North America / Costa Rica / Limon 2 0 0%
North America / Costa Rica / Puntarenas 3 0 0%
North America / Costa Rica / San Jose 11 0 0%
North America / Dominican Republic 38 0 0%
North America / Dominican Republic / Azua 1 0 0%
North America / Dominican Republic / Distrito Nacional 9 0 0%
North America / Dominican Republic / Duarte 1 0 0%
North America / Dominican Republic / Espaillat 6 0 0%
North America / Dominican Republic / Hato Mayor 1 0 0%
North America / Dominican Republic / La Vega 1 0 0%
North America / Dominican Republic / Monsenor Nouel 3 0 0%
North America / Dominican Republic / Peravia 2 0 0%
North America / Dominican Republic / Samana 1 0 0%
North America / Dominican Republic / San Cristobal 1 0 0%
North America / Dominican Republic / San Pedro De Macoris 1 0 0%
North America / Dominican Republic / Santiago 1 0 0%
North America / Dominican Republic / Santo Domingo 9 0 0%
North America / Dominican Republic / Valverde 1 0 0%
North America / Puerto Rico 18 0 0%
North America / USA 696 1 0%
North America / USA / Arizona 44 0 0%
North America / USA / Arizona / Graham 7 0 0%
North America / USA / Arizona / Maricopa 12 0 0%
North America / USA / Arizona / Mohave 2 0 0%
North America / USA / Arizona / Pima 23 0 0%
North America / USA / California 138 1 1%
North America / USA / California / Contra Costa 19 0 0%
North America / USA / Colorado 47 0 0%
North America / USA / Florida 5 0 0%
North America / USA / Georgia 10 0 0%
North America / USA / Hawaii 3 0 0%
North America / USA / Illinois 5 0 0%
North America / USA / Illinois / Cook County 3 0 0%
North America / USA / Illinois / Jo Daviess 1 0 0%
North America / USA / Illinois / Stephenson 1 0 0%
North America / USA / Louisiana 1 0 0%
North America / USA / Maryland 85 0 0%
North America / USA / Michigan 3 0 0%
North America / USA / Missouri 1 0 0%
North America / USA / Nevada 8 0 0%
North America / USA / Nevada / Clark 7 0 0%
North America / USA / Nevada / Douglas 1 0 0%
North America / USA / New Jersey 21 0 0%
North America / USA / New Mexico 7 0 0%
North America / USA / New York 242 0 0%
North America / USA / New York / Albany 2 0 0%
North America / USA / New York / Allegany County 1 0 0%
North America / USA / New York / Cayuga 1 0 0%
North America / USA / New York / Columbia 1 0 0%
North America / USA / New York / Cortland 2 0 0%
North America / USA / New York / Fulton 1 0 0%
North America / USA / New York / Genesee County 1 0 0%
North America / USA / New York / Herkimer 2 0 0%
North America / USA / New York / Jefferson 1 0 0%
North America / USA / New York / Lewis 2 0 0%
North America / USA / New York / Livingston County 1 0 0%
North America / USA / New York / Madison 3 0 0%
North America / USA / New York / Monroe County 18 0 0%
North America / USA / New York / New York City 133 0 0%
North America / USA / New York / Onondaga 47 0 0%
North America / USA / New York / Ontario County 5 0 0%
North America / USA / New York / Oswego 1 0 0%
North America / USA / New York / Rensselaer 1 0 0%
North America / USA / New York / Saratoga 1 0 0%
North America / USA / New York / Steuben County 1 0 0%
North America / USA / New York / Wayne County 1 0 0%
North America / USA / New York / Wyoming County 1 0 0%
North America / USA / North Dakota 3 0 0%
North America / USA / Oregon 7 0 0%
North America / USA / South Carolina 1 0 0%
North America / USA / Texas 9 0 0%
North America / USA / Texas / Johnson 2 0 0%
North America / USA / Texas / Tarrant 7 0 0%
North America / USA / Utah 27 0 0%
North America / USA / Virginia 17 0 0%
North America / USA / Washington 11 0 0%
North America / USA / Wyoming 1 0 0%
Oceania / Australia 912 36 4%
Oceania / Australia / New South Wales 387 2 1%
Oceania / Australia / New South Wales / Sydney 387 2 1%
Oceania / Australia / Queensland 178 2 1%
Oceania / Australia / South Australia 265 29 11%
Oceania / Australia / Victoria 12 3 25%
Oceania / Australia / Western Australia 70 0 0%
Oceania / New Caledonia 7 0 0%
Oceania / New Caledonia / Boulouparis 1 0 0%
Oceania / New Caledonia / Houailou 1 0 0%
Oceania / New Caledonia / Noumea 3 0 0%
Oceania / New Caledonia / Paita 1 0 0%
Oceania / New Caledonia / Poindimie 1 0 0%
Oceania / New Zealand 105 0 0%
Oceania / New Zealand / Auckland 10 0 0%
Oceania / New Zealand / Bay of Plenty 3 0 0%
Oceania / New Zealand / Canterbury 3 0 0%
Oceania / New Zealand / Capital and Coast 2 0 0%
Oceania / New Zealand / Counties Manukau 9 0 0%
Oceania / New Zealand / Hutt Valley 20 0 0%
Oceania / New Zealand / MidCentral 1 0 0%
Oceania / New Zealand / Nelson Marlborough 4 0 0%
Oceania / New Zealand / Northland 6 0 0%
Oceania / New Zealand / South Canterbury 2 0 0%
Oceania / New Zealand / Southern 24 0 0%
Oceania / New Zealand / Taranaki 7 0 0%
Oceania / New Zealand / Waikato 8 0 0%
Oceania / New Zealand / Wairarapa 1 0 0%
Oceania / New Zealand / West Coast 5 0 0%
South America / Brazil 73 0 0%
South America / Brazil / Alagoas 1 0 0%
South America / Brazil / Alagoas / Marechal Deodoro 1 0 0%
South America / Brazil / Bahia 4 0 0%
South America / Brazil / Bahia / Anguera 1 0 0%
South America / Brazil / Bahia / Feira de Santana 1 0 0%
South America / Brazil / Bahia / Ilheus 1 0 0%
South America / Brazil / Bahia / Salvador 1 0 0%
South America / Brazil / Espirito Santo 8 0 0%
South America / Brazil / Espirito Santo / Irupi 1 0 0%
South America / Brazil / Espirito Santo / Marechal Floriano 1 0 0%
South America / Brazil / Espirito Santo / Pedro Canario 1 0 0%
South America / Brazil / Espirito Santo / Santa Maria de Jetiba 1 0 0%
South America / Brazil / Espirito Santo / Serra 1 0 0%
South America / Brazil / Espirito Santo / Vitoria 3 0 0%
South America / Brazil / Federal District 5 0 0%
South America / Brazil / Federal District / Nucleo Bandeirante 1 0 0%
South America / Brazil / Federal District / Plano Piloto 2 0 0%
South America / Brazil / Federal District / Santa Maria 1 0 0%
South America / Brazil / Federal District / Sobradinho 1 0 0%
South America / Brazil / Goias 17 0 0%
South America / Brazil / Goias / Anapolis 1 0 0%
South America / Brazil / Goias / Fazenda nova 1 0 0%
South America / Brazil / Goias / Goiania 9 0 0%
South America / Brazil / Goias / Itumbiara 1 0 0%
South America / Brazil / Goias / Pirenopolis 2 0 0%
South America / Brazil / Goias / Rio verde 1 0 0%
South America / Brazil / Goias / Sao Luis de Montes Belos 1 0 0%
South America / Brazil / Goias / Valparaiso De Goias 1 0 0%
South America / Brazil / Para 1 0 0%
South America / Brazil / Parana 1 0 0%
South America / Brazil / Parana / Telemaco Borba 1 0 0%
South America / Brazil / Rio de Janeiro 15 0 0%
South America / Brazil / Rio de Janeiro / Araruama 1 0 0%
South America / Brazil / Rio de Janeiro / Itaborai 1 0 0%
South America / Brazil / Rio de Janeiro / Rio Bonito 1 0 0%
South America / Brazil / Rio de Janeiro / Rio de Janeiro 12 0 0%
South America / Brazil / Rio Grande do Norte 6 0 0%
South America / Brazil / Rio Grande do Norte / Natal 4 0 0%
South America / Brazil / Rio Grande do Norte / Santo Antonio 1 0 0%
South America / Brazil / Rio Grande do Norte / Sao Goncalo do Amarante 1 0 0%
South America / Brazil / Rondonia 1 0 0%
South America / Brazil / Rondonia / Porto Velho 1 0 0%
South America / Brazil / Roraima 1 0 0%
South America / Brazil / Santa Catarina 9 0 0%
South America / Brazil / Santa Catarina / Capivari de Baixo 1 0 0%
South America / Brazil / Santa Catarina / Chapeco 1 0 0%
South America / Brazil / Santa Catarina / Florianopolis 4 0 0%
South America / Brazil / Santa Catarina / Itapema 1 0 0%
South America / Brazil / Santa Catarina / Jaragua do Sul 1 0 0%
South America / Brazil / Santa Catarina / Rio do Sul 1 0 0%
South America / Brazil / Sao Paulo 4 0 0%
South America / Brazil / Sao Paulo / Sao Paulo 3 0 0%
South America / Chile 11 0 0%
South America / Chile / Coquimbo 1 0 0%
South America / Chile / Coquimbo / La Serena 1 0 0%
South America / Chile / Los Rios 2 0 0%
South America / Chile / Los Rios / Rio Bueno 1 0 0%
South America / Chile / Los Rios / Valdivia 1 0 0%
South America / Chile / Maule 2 0 0%
South America / Chile / Maule / Curico 2 0 0%
South America / Chile / Region Metropolitana de Santiago 2 0 0%
South America / Chile / Region Metropolitana de Santiago / Pudahuel 1 0 0%
South America / Chile / Region Metropolitana de Santiago / Santiago 1 0 0%
South America / Chile / Valparaiso 4 0 0%
South America / Chile / Valparaiso / Valparaiso 4 0 0%
South America / Ecuador 12 0 0%
South America / Ecuador / Chimborazo 1 0 0%
South America / Ecuador / Cotopaxi 2 0 0%
South America / Ecuador / Imbabura 2 0 0%
South America / Ecuador / Napo 1 0 0%
South America / Ecuador / Pichincha 6 0 0%

Last Updated: 4 July 2026 21:59 BST — Local:

Table excludes airport surveillance samples from the USA and environmental samples from Germany. There may still be some others in the counts that shouldn't be there.

Acknowledgements

We gratefully acknowledge GISAID and the many data contributors around the world for sharing SARS-CoV-2 sequences.

This analysis makes use of the Nextclade CLI.
Aksamentov, I., Roemer, C., Hodcroft, E. B., & Neher, R. A., (2021). Nextclade: clade assignment, mutation calling and quality control for viral genomes. Journal of Open Source Software, 6(67), 3773, https://doi.org/10.21105/joss.03773

Special thanks to Josette Schoenmakers ( @josetteschoenma.bsky.social on BlueSky @JosetteSchoenma on Twitter) for the table concepts.